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← Primer database

Primer database

COL1A1 / Col1a1: candidate comparison

Every COL1A1 / Col1a1 primer pair on file, overlaid on one shared exon axis, where each design actually binds, relative to the others.

Species:AllCanis lupus familiarisMus musculus
COL1A1 / Col1a111.5kb2122bp3119bp490bp5785bp6237bp7162bp8160bp9373bp10119bp11330bp1281bp1398bp14113bp15136bp16234bp1789bp1893bp19119bp20181bp21103bp22283bp23148bp2489bp25523bp26189bp27100bp28108bp29400bp3087bp31212bp32356bp33191bp34148bp35244bp3688bp37110bp38130bp39103bp40341bp41103bp42109bp43367bp44121bp45256bp46323bp4786bp48135bp49201bp50129bp51PMID 42063173193 bp · junctionPMID 36686707203 bp · junctionPMID 39916997271 bp · junctionPMID 39898320276 bp · junction

⚠ 1pair(s) only mapped onto a different isoform than the one shown above, so they can't be plotted on this shared axis: PMID 36865375

SourceOrganismAmpliconTmSpecificity
PMID 42063173Mus musculus193 bp62.4 °CF 62.3 / R 62.5specificView →
PMID 36865375Canis lupus familiaris174 bp62.7 °CF 62.8 / R 62.7specificView →
PMID 36686707Mus musculus203 bp64.3 °CF 64.2 / R 64.3specificView →
PMID 39916997Mus musculus271 bp63.8 °CF 63.7 / R 63.8specificView →
PMID 39898320Mus musculus276 bp63.6 °CF 63.4 / R 63.9specificView →

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