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qPCR Primer Database

Published qPCR primer pairs with the efficiency each source reported, exon-level mapping on Ensembl transcripts and an off-target specificity check.

1094

Primer pairs

874

Genes

15

Organisms

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27 primer pairs · filtered from 1094

Gene ↑OrganismAmpliconSourceMappingMeasurementsMean E
FasLHomo sapiens104 bpPublicationVerified✓ Specific——
NgfrRattus norvegicus241 bpPublicationVerified✓ Specific——
NGFRHomo sapiens109 bpPublicationVerified✓ Specific——
STEAP4Homo sapiens102 bpPublicationVerified✓ Specific——
Tnf⇄ compare (3)Mus musculus228 bpPublicationVerified✓ Specific——
Tnf⇄ compare (3)Rattus norvegicus136 bpPublicationVerified✓ Specific——
Tnf⇄ compare (3)Rattus norvegicus81 bpPublicationVerified✓ Specific——
Tnf⇄ compare (3)Mus musculus92 bpPublicationVerified✓ Specific——
Tnf⇄ compare (3)Mus musculus61 bpPublicationVerified✓ Specific——
Tnf⇄ compare (3)Rattus norvegicus215 bpPublicationVerified✓ Specific——
TNFSus scrofa129 bpPublicationVerified✓ Specific——
TNF⇄ compare (5)Homo sapiens81 bpPublicationVerified✓ Specific——
TNF⇄ compare (5)Homo sapiens97 bpPublicationVerified✓ Specific——
TNF⇄ compare (5)Homo sapiens135 bpPublicationVerified✓ Specific——
TNF⇄ compare (5)Homo sapiens149 bpPublicationVerified✓ Specific——
TNF⇄ compare (5)Homo sapiens91 bpPublicationVerified✓ Specific——
TNF-alphaRattus norvegicus103 bpPublicationVerified✓ Specific——
Tnfrsf11bMus musculus157 bpPublicationVerified✓ Specific——
TNFRSF13CHomo sapiens95 bpPublicationVerified✓ Specific——
TNFRSF9Sus scrofa112 bpPublicationVerified✓ Specific——
TNFSF10Homo sapiens79 bpPublicationVerified✓ Specific——
Tnfsf11Rattus norvegicus134 bpPublicationVerified✓ Specific——
Tnfsf11Mus musculus134 bpPublicationVerified✓ Specific——
TNFSF11Homo sapiens161 bpPublicationVerified✓ Specific——
TNIP1
TNFAIP3 interacting protein 1
Homo sapiens214 bpPublicationVerified✓ Specific——
TRAF5
TNF receptor associated factor 5
Homo sapiens133 bpPublicationVerified✓ Specific——
TRAF6
TNF receptor associated factor 6
Homo sapiens155 bpPublicationVerified✓ Specific——

Using primers from this database? Analyse your qPCR run with LinRegPCR efficiency correction and a MIQE 2.0 report. Analyse your data →